STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107091057Ras association domain family member 6. (348 aa)    
Predicted Functional Partners:
LOC107085037
Uncharacterized protein.
      
 0.635
LOC107100240
Uncharacterized protein.
    
 0.619
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.619
ENSCVAP00000002715
APC membrane recruitment protein 2.
    
 
 0.560
SLCO3A1
Solute carrier organic anion transporter family member.
   
  
 0.505
LOC107087254
Solute carrier organic anion transporter family member.
   
  
 0.505
eprs1
Glutamyl-prolyl-tRNA synthetase.
      
 0.491
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
  
 0.480
RASSF10
Ras association domain family member 10.
   
  
 0.466
sav1
Salvador family WW domain containing protein 1.
    
 
 0.460
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.