STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003994Urotensin-related peptide 1. (150 aa)    
Predicted Functional Partners:
zmynd10
Zinc finger, MYND-type containing 10.
      
 0.671
ENSCVAP00000006150
Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family.
      
 0.671
gal
Galanin/GMAP prepropeptide.
      
 0.671
ENSCVAP00000017373
Urotensin 2 domain containing.
      
 0.655
LOC107080881
Pleckstrin homology domain containing, family N member 1.
  
     0.409
armc9
Armadillo repeat containing 9.
      
 0.408
LOC107090868
Ectonucleoside triphosphate diphosphohydrolase 5b; Belongs to the GDA1/CD39 NTPase family.
      
 0.403
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.