STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107091061Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
ENSCVAP00000000311
Interleukin 11a.
     
 0.777
LOC107099583
Uncharacterized protein.
   
 0.610
LOC107091150
Uncharacterized protein.
   
 0.610
il6st
Uncharacterized protein.
   
0.610
LOC107099584
Interleukin 12 receptor, beta 2a.
   
 0.610
LOC107100826
Uncharacterized protein.
   
 0.513
LOC107084721
Colony stimulating factor 3 receptor (granulocyte).
   
 0.513
clgn
Calmegin.
    
  0.479
canx
Calnexin.
    
  0.479
ENSCVAP00000004979
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
 0.449
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.