STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107085558RUN domain containing 3Ab. (432 aa)    
Predicted Functional Partners:
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.485
TMEM19
Transmembrane protein 19.
      
 0.479
uvrag
UV radiation resistance associated gene.
    
 
 0.466
ENSCVAP00000004504
AP2 associated kinase 1b.
    
   0.436
LOC107093873
AP2 associated kinase 1a.
    
   0.436
tmem145
Transmembrane protein 145.
   
  
 0.419
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.408
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.