STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107091063Ciliary neurotrophic factor receptor. (361 aa)    
Predicted Functional Partners:
LOC107091287
IL-6 subfamily cytokine M17.
     
 0.962
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.923
il6st
Uncharacterized protein.
   
0.918
LOC107103740
Uncharacterized protein.
    
 0.886
LOC107092589
Uncharacterized protein.
    
 0.886
LOC107084616
Uncharacterized protein.
     
  0.800
ENSCVAP00000000311
Interleukin 11a.
     
 0.618
LOC107099583
Uncharacterized protein.
   
 0.610
LOC107091150
Uncharacterized protein.
   
 0.610
LOC107099584
Interleukin 12 receptor, beta 2a.
   
 0.610
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.