STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcbd1Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha. (102 aa)    
Predicted Functional Partners:
qdpr
Quinoid dihydropteridine reductase a.
   
 
 0.981
th
Tyrosine hydroxylase.
  
 0.980
LOC107101475
Uncharacterized protein.
  
 0.980
pah
Phenylalanine hydroxylase.
  
 0.980
LOC107085478
Tyrosine hydroxylase 2.
  
 0.980
TPH1
Tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a.
  
 0.980
tph2
Tryptophan hydroxylase 2 (tryptophan 5-monooxygenase).
  
 0.980
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
  
 
0.902
iyd
Iodotyrosine deiodinase.
  
 
  0.888
hgd
Homogentisate 1,2-dioxygenase.
  
  
 0.770
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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