STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107099133Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
LOC107104443
Intersectin 2b.
    
 0.991
ENSCVAP00000031587
Uncharacterized protein.
    
 0.991
ENSCVAP00000031602
Uncharacterized protein.
    
 0.991
rock2
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.967
rock1
Rho-associated, coiled-coil containing protein kinase 1.
   
 0.967
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
   
 0.962
DIAPH1
Diaphanous related formin 1.
   
 0.961
arhgap5
Rho GTPase activating protein 5.
    
 0.958
LOC107101005
Rho GTPase activating protein 35b.
    
 0.958
arhgap35
Uncharacterized protein.
    
 0.958
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.