STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098380cAMP responsive element binding protein 3-like 3a. (434 aa)    
Predicted Functional Partners:
LOC107088346
Uncharacterized protein.
    
 0.934
crebbp
CREB binding protein b.
    
 0.819
LOC107083428
CREB binding protein a.
    
 0.819
LOC107092878
E1A binding protein p300 a.
    
 0.819
ep300
E1A binding protein p300 b.
    
 0.819
mbtps2
Membrane-bound transcription factor peptidase, site 2.
     
 0.793
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.787
crebrf
Creb3 regulatory factor.
    
 0.732
LOC107095820
Ribosomal protein S6 kinase.
    
  0.653
LOC107091383
Ribosomal protein S6 kinase.
    
  0.653
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.