STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP000000041345-hydroxytryptamine receptor 4. (332 aa)    
Predicted Functional Partners:
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.564
GNAS
GNAS complex locus.
    
 0.556
LOC107100929
Uncharacterized protein.
    
 0.556
LOC107103230
GNAS complex locus.
    
 0.556
LOC107095436
Uncharacterized protein.
    
 0.556
LOC107081500
WD_REPEATS_REGION domain-containing protein.
    
  0.543
LOC107089355
WD_REPEATS_REGION domain-containing protein.
    
  0.543
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.543
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.543
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.543
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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