STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr10Myotubularin related protein 10. (765 aa)    
Predicted Functional Partners:
mtmr2
Myotubularin related protein 2.
   
0.731
mtm1
Myotubularin 1.
   
0.700
ENSCVAP00000015010
Uncharacterized protein.
   
0.700
LOC107087406
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
      
 0.635
ENSCVAP00000032118
Guanylate kinase-like domain-containing protein.
   
 
 0.519
MTMR4
Myotubularin related protein 4.
    
0.429
ENSCVAP00000014436
FYVE-type domain-containing protein.
    
 0.429
mtmr3
Myotubularin phosphatase domain-containing protein.
    
0.429
wdr26
WD repeat domain 26b.
   
  
 0.411
wdr91
WD repeat domain 91.
      
 0.408
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.