STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
furinFurin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (841 aa)    
Predicted Functional Partners:
LOC107093919
Matrix metallopeptidase 11.
    
 0.789
LOC107103644
Matrix metallopeptidase 11a.
    
 0.737
gramd4
GRAM domain containing 4a.
    
 0.689
GRAMD4
GRAM domain containing 4.
    
 0.689
syk
Tyrosine-protein kinase.
   
 
 0.678
lig4
DNA ligase.
   
  
 0.677
tnfsf12
TNF superfamily member 12; Belongs to the tumor necrosis factor family.
   
  
 0.674
LOC107103699
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.668
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
  
 0.666
LOC107089263
CD40 ligand; Belongs to the tumor necrosis factor family.
      
 0.665
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.