STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfebTranscription factor EB. (512 aa)    
Predicted Functional Partners:
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.895
LOC107100387
Transcription factor binding to IGHM enhancer 3b.
  
 
0.882
LOC107082335
Melanocyte inducing transcription factor a.
  
 
0.880
MITF
Melanocyte inducing transcription factor b.
  
 
0.879
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.842
LOC107087875
Ras-related GTP binding A.
    
 
 0.754
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
 0.654
LOC107094261
Uncharacterized protein.
    
 
 0.652
rragc
Ras-related GTP binding Ca.
    
 
 0.652
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.635
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.