RBM38 protein (Cyprinodon variegatus) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

RBM38

RNA binding motif protein 38. (244 aa)

Predicted Functional Partners:

LOC107088828

0.726

LOC107095966

0.726

LOC107093008

0.558

elavl3

0.550

LOC107099166

0.539

LOC107091963

0.537

ELAVL2

0.512

ENSCVAP00000000909

0.487

LOC107098143

0.472

tra2a

0.464

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELAVL2	ENSCVAP00000000909	ENSCVAP00000027496	ENSCVAP00000000909	ELAV-like protein; Belongs to the RRM elav family.	Serine and arginine rich splicing factor 6.	0.444
ELAVL2	LOC107088828	ENSCVAP00000027496	ENSCVAP00000024122	ELAV-like protein; Belongs to the RRM elav family.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.485
ELAVL2	LOC107095966	ENSCVAP00000027496	ENSCVAP00000029014	ELAV-like protein; Belongs to the RRM elav family.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.461
ELAVL2	RBM38	ENSCVAP00000027496	ENSCVAP00000004191	ELAV-like protein; Belongs to the RRM elav family.	RNA binding motif protein 38.	0.512
ELAVL2	tra2a	ENSCVAP00000027496	ENSCVAP00000002775	ELAV-like protein; Belongs to the RRM elav family.	RRM domain-containing protein.	0.566
ENSCVAP00000000909	ELAVL2	ENSCVAP00000000909	ENSCVAP00000027496	Serine and arginine rich splicing factor 6.	ELAV-like protein; Belongs to the RRM elav family.	0.444
ENSCVAP00000000909	LOC107088828	ENSCVAP00000000909	ENSCVAP00000024122	Serine and arginine rich splicing factor 6.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.437
ENSCVAP00000000909	LOC107091963	ENSCVAP00000000909	ENSCVAP00000014041	Serine and arginine rich splicing factor 6.	ELAV-like protein; Belongs to the RRM elav family.	0.477
ENSCVAP00000000909	LOC107093008	ENSCVAP00000000909	ENSCVAP00000014491	Serine and arginine rich splicing factor 6.	ELAV-like protein; Belongs to the RRM elav family.	0.474
ENSCVAP00000000909	LOC107095966	ENSCVAP00000000909	ENSCVAP00000029014	Serine and arginine rich splicing factor 6.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.457
ENSCVAP00000000909	RBM38	ENSCVAP00000000909	ENSCVAP00000004191	Serine and arginine rich splicing factor 6.	RNA binding motif protein 38.	0.487
ENSCVAP00000000909	elavl3	ENSCVAP00000000909	ENSCVAP00000011732	Serine and arginine rich splicing factor 6.	ELAV-like protein; Belongs to the RRM elav family.	0.468
ENSCVAP00000000909	tra2a	ENSCVAP00000000909	ENSCVAP00000002775	Serine and arginine rich splicing factor 6.	RRM domain-containing protein.	0.809
LOC107088828	ELAVL2	ENSCVAP00000024122	ENSCVAP00000027496	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	ELAV-like protein; Belongs to the RRM elav family.	0.485
LOC107088828	ENSCVAP00000000909	ENSCVAP00000024122	ENSCVAP00000000909	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	Serine and arginine rich splicing factor 6.	0.437
LOC107088828	LOC107091963	ENSCVAP00000024122	ENSCVAP00000014041	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	ELAV-like protein; Belongs to the RRM elav family.	0.519
LOC107088828	LOC107093008	ENSCVAP00000024122	ENSCVAP00000014491	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	ELAV-like protein; Belongs to the RRM elav family.	0.514
LOC107088828	RBM38	ENSCVAP00000024122	ENSCVAP00000004191	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 38.	0.726
LOC107088828	elavl3	ENSCVAP00000024122	ENSCVAP00000011732	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	ELAV-like protein; Belongs to the RRM elav family.	0.517
LOC107091963	ENSCVAP00000000909	ENSCVAP00000014041	ENSCVAP00000000909	ELAV-like protein; Belongs to the RRM elav family.	Serine and arginine rich splicing factor 6.	0.477