LOC107100870 protein (Cyprinodon variegatus)

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

LOC107100870

Histocompatibility (minor) 13. (125 aa)

Predicted Functional Partners:

LOC107081332

0.900

rnf139

0.617

derl1

0.616

hsp90b1

0.590

sec61a1

0.575

ssr2

0.537

ssr3

0.532

mbtps2

0.408

lman1

0.402

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107081332	LOC107100870	ENSCVAP00000024486	ENSCVAP00000004209	Uncharacterized protein.	Histocompatibility (minor) 13.	0.900
LOC107081332	derl1	ENSCVAP00000024486	ENSCVAP00000015480	Uncharacterized protein.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.616
LOC107081332	hsp90b1	ENSCVAP00000024486	ENSCVAP00000007180	Uncharacterized protein.	Heat shock protein 90, beta (grp94), member 1.	0.590
LOC107081332	lman1	ENSCVAP00000024486	ENSCVAP00000028973	Uncharacterized protein.	Lectin, mannose-binding, 1.	0.402
LOC107081332	mbtps2	ENSCVAP00000024486	ENSCVAP00000026232	Uncharacterized protein.	Membrane-bound transcription factor peptidase, site 2.	0.408
LOC107081332	rnf139	ENSCVAP00000024486	ENSCVAP00000001428	Uncharacterized protein.	Ring finger protein 139.	0.617
LOC107081332	sec61a1	ENSCVAP00000024486	ENSCVAP00000022741	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.575
LOC107081332	ssr2	ENSCVAP00000024486	ENSCVAP00000003557	Uncharacterized protein.	Signal sequence receptor, beta.	0.537
LOC107081332	ssr3	ENSCVAP00000024486	ENSCVAP00000009884	Uncharacterized protein.	Signal sequence receptor, gamma.	0.532
LOC107100870	LOC107081332	ENSCVAP00000004209	ENSCVAP00000024486	Histocompatibility (minor) 13.	Uncharacterized protein.	0.900
LOC107100870	derl1	ENSCVAP00000004209	ENSCVAP00000015480	Histocompatibility (minor) 13.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.616
LOC107100870	hsp90b1	ENSCVAP00000004209	ENSCVAP00000007180	Histocompatibility (minor) 13.	Heat shock protein 90, beta (grp94), member 1.	0.590
LOC107100870	lman1	ENSCVAP00000004209	ENSCVAP00000028973	Histocompatibility (minor) 13.	Lectin, mannose-binding, 1.	0.402
LOC107100870	mbtps2	ENSCVAP00000004209	ENSCVAP00000026232	Histocompatibility (minor) 13.	Membrane-bound transcription factor peptidase, site 2.	0.408
LOC107100870	rnf139	ENSCVAP00000004209	ENSCVAP00000001428	Histocompatibility (minor) 13.	Ring finger protein 139.	0.617
LOC107100870	sec61a1	ENSCVAP00000004209	ENSCVAP00000022741	Histocompatibility (minor) 13.	Plug_translocon domain-containing protein.	0.575
LOC107100870	ssr2	ENSCVAP00000004209	ENSCVAP00000003557	Histocompatibility (minor) 13.	Signal sequence receptor, beta.	0.537
LOC107100870	ssr3	ENSCVAP00000004209	ENSCVAP00000009884	Histocompatibility (minor) 13.	Signal sequence receptor, gamma.	0.532
derl1	LOC107081332	ENSCVAP00000015480	ENSCVAP00000024486	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Uncharacterized protein.	0.616
derl1	LOC107100870	ENSCVAP00000015480	ENSCVAP00000004209	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Histocompatibility (minor) 13.	0.616