STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098387Uncharacterized protein. (1525 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
0.995
LOC107084483
Uncharacterized protein.
    
0.995
LOC107095553
Regulating synaptic membrane exocytosis protein 2 isoform X1.
    
 0.995
agrn
Agrin.
   
  
 0.673
Med26
TFIIS N-terminal domain-containing protein.
   
  
 0.672
slc35d1
Solute carrier family 35 member D1a.
   
  
 0.669
TNPO2
Transportin 2.
   
  
 0.668
c9orf72
Zgc:100846.
      
 0.668
KCNN1
CaMBD domain-containing protein.
   
  
 0.668
tnpo2
Transportin 2 (importin 3, karyopherin beta 2b).
   
  
 0.668
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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