STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sash3SAM and SH3 domain containing 3. (392 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 
 0.578
LOC107093135
T cell activation RhoGTPase activating protein.
   
  
 0.545
ENSCVAP00000001419
Tetraspanin.
   
  
 0.453
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.452
SHC3
SHC adaptor protein 3.
    
 0.452
shc2
SHC (Src homology 2 domain containing) transforming protein 2.
    
 0.452
il4r
Uncharacterized protein.
   
 
  0.449
klhl6
BTB domain-containing protein.
   
  
 0.446
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 
 0.438
LOC107086704
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 
 0.438
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.