STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMEMembrane metalloendopeptidase. (770 aa)    
Predicted Functional Partners:
agt
Angiotensinogen; Belongs to the serpin family.
    
 0.775
gmps
Guanine monophosphate synthase.
   
  
 0.672
plch1
Phosphoinositide phospholipase C.
      
 0.671
LOC107081994
Fibroblast activation protein, alpha; Belongs to the peptidase S9B family.
      
 0.669
LOC107086637
Uncharacterized protein; Belongs to the peptidase S9B family.
      
 0.669
LOC107102657
Uncharacterized protein.
     
 0.605
ide
Insulin-degrading enzyme; Belongs to the peptidase M16 family.
      
 0.541
dipk2a
Divergent protein kinase domain 2Ab.
   
    0.534
slc33a1
Solute carrier family 33 member 1.
   
  
 0.494
plch2
Phosphoinositide phospholipase C.
      
 0.489
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.