STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirt6Sirtuin 6. (349 aa)    
Predicted Functional Partners:
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.950
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.940
LOC107094217
NAD kinase b.
  
 
 0.921
nadk
NAD kinase a.
  
 
 0.921
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
 0.914
ENSCVAP00000001554
Uncharacterized protein.
    
  0.900
nnt
Nicotinamide nucleotide transhydrogenase.
   
 
 0.900
LOC107093143
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
    
  0.900
LOC107085358
Nicotinamide nucleotide transhydrogenase 2.
   
 
 0.900
Rbbp8
SAE2 domain-containing protein.
    
 0.807
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.