STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107101505PNKD metallo-beta-lactamase domain containing. (359 aa)    
Predicted Functional Partners:
Suox
Sulfite oxidase.
   
  
 0.681
glod4
Glyoxalase domain containing 4.
  
 
 0.555
ybey
YbeY metalloendoribonuclease.
  
 
 0.516
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 
 0.502
mcee
Methylmalonyl CoA epimerase.
  
 
 0.502
glyr1
Glyoxylate reductase 1 homolog (Arabidopsis).
    
 
 0.494
LOC107084677
Si:ch211-248a14.8.
      
 0.483
hao1
Hydroxyacid oxidase (glycolate oxidase) 1.
    
 0.467
hao2
Hydroxyacid oxidase 2 (long chain).
    
 0.467
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.461
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.