STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtr2Cap methyltransferase 2. (763 aa)    
Predicted Functional Partners:
cog4
Component of oligomeric golgi complex 4.
      
 0.672
cpne2
Copine II.
      
 0.672
psme3ip1
Family with sequence similarity 192 member A.
      
 0.672
rnmt
mRNA cap guanine-N7 methyltransferase.
      
 0.655
rngtt
Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.
   
  
 0.630
ust
Uronyl 2-sulfotransferase a.
      
 0.576
DXO
Decapping exoribonuclease.
      
 0.569
gpatch2
G-patch domain containing 2.
      
 0.564
EXOSC6
Exosome component 6.
      
 0.540
ENSCVAP00000031624
Exosome component 6.
      
 0.540
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.