STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
per1Period circadian clock 1b. (1445 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
   
 0.825
LOC107103492
Cryptochrome circadian regulator 3a.
   
 0.798
LOC107089544
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.757
LOC107096663
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.757
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.757
LOC107099355
Casein kinase 1, delta b; Belongs to the protein kinase superfamily.
    
 0.757
LOC107082759
Cryptochrome circadian regulator 5.
   
 0.756
LOC107082592
Zgc:66475.
   
 0.735
bhlhe41
Basic helix-loop-helix family, member e41.
    
 0.717
LOC107085871
Cryptochrome circadian regulator 1a.
   
 0.695
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.