STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107092718Nucleic acid binding protein 1a. (219 aa)    
Predicted Functional Partners:
ints3
Integrator complex subunit 3.
    
 0.971
ints1
Integrator complex subunit 1.
    
 0.953
ints5
Integrator complex subunit 5.
    
 0.951
ENSCVAP00000012531
Ints3 and nabp interacting protein.
    
 
 0.803
inip
Uncharacterized protein.
    
 
 0.803
ints6
Integrator complex subunit 6.
    
 0.802
ints6l
Integrator complex subunit 6 like.
    
 0.802
ints9
Integrator complex subunit 9.
   
 0.746
ints11
Integrator complex subunit 11.
   
 0.730
ints7
Integrator complex subunit 7.
     
 0.701
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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