STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107088618Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (527 aa)    
Predicted Functional Partners:
hsd17b12
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.929
comt
Catechol-O-methyltransferase b.
   
 
 0.929
LOC107095599
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.928
ephx1
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
  
 0.927
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
   
 
 0.927
LOC107089910
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
0.926
LOC107093869
Indoleamine 2,3-dioxygenase 1.
   
 
 0.926
LOC107102568
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.925
LOC107103711
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.923
LOC107086828
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 0.923
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.