STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmdn2Regulator of microtubule dynamics 2. (438 aa)    
Predicted Functional Partners:
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.557
LOC107101132
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.557
LOC107100728
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.521
LOC107104423
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.503
vapb
MSP domain-containing protein.
    
 0.502
stard3nl
STARD3 N-terminal like.
    
 
 0.483
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.475
LOC107094528
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.449
LOC107091981
Lysophosphatidylcholine acyltransferase 4.
     
 0.449
mospd2
Motile sperm domain containing 2.
   
 
 0.448
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.