STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107097206Uncharacterized protein. (693 aa)    
Predicted Functional Partners:
LOC107089987
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.663
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.663
LOC107100829
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 
 0.582
LOC107099626
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 
 0.582
LOC107097117
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 
 0.582
LOC107097118
Uncharacterized protein.
    
 
 0.582
LOC107097497
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 
 0.516
LOC107087481
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.514
LOC107103784
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
    
 
 0.489
LOC107104314
Uncharacterized protein.
    
 
 0.489
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.