STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla2g6Phospholipase A2, group VI (cytosolic, calcium-independent). (794 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.820
gak
Cyclin G associated kinase.
   
  
 0.677
coasy
CoA synthase.
      
 0.672
chchd2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
      
 0.671
fbxo7
F-box protein 7.
      
 0.671
ENSCVAP00000025412
Uncharacterized protein.
      
 0.667
tecpr2
Tectonin beta-propeller repeat containing 2.
      
 0.667
baiap2l2
BAI1-associated protein 2-like 2b.
      
 0.644
cbx6
Chromobox homolog 6a.
   
  
 0.640
RIC3
RIC3 acetylcholine receptor chaperone.
      
 0.637
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.