STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000004739Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
gulp1
GULP PTB domain containing engulfment adaptor 1a.
   
 
 0.533
LAMA2
Laminin subunit alpha 2.
    
 
0.471
ENSCVAP00000017590
Uncharacterized protein.
    
  0.471
lama4
Laminin, alpha 4.
    
  0.446
lama5
Laminin, alpha 5.
    
 
0.446
Lama3
Uncharacterized protein.
    
  0.446
itgb4
Integrin beta.
   
 0.425
ENSCVAP00000020522
Uncharacterized protein; Belongs to the integrin alpha chain family.
    
 0.411
itga3
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.411
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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