STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd6Major facilitator superfamily domain containing 6a. (729 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.661
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.660
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.569
miga1
Mitoguardin 1.
      
 0.561
mfsd8
Major facilitator superfamily domain containing 8.
      
 0.560
unc93a
Unc-93 homolog A.
      
 0.546
csgalnact2
Hexosyltransferase.
      
 0.495
LOC107083102
Uncharacterized protein.
      
 0.485
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.485
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.485
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.