STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107082726Solute carrier family 36 member 1. (481 aa)    
Predicted Functional Partners:
gpr50
Melatonin receptor 1C; Belongs to the G-protein coupled receptor 1 family.
      
 0.672
fat2
FAT atypical cadherin 2.
      
 0.672
fat1
FAT atypical cadherin 1a.
      
 0.672
drd2
Dopamine receptor D2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.672
LOC107087910
Melatonin receptor 1Bb; Belongs to the G-protein coupled receptor 1 family.
      
 0.664
pikfyve
Phosphoinositide kinase, FYVE finger containing.
    
 
 0.655
LOC107087875
Ras-related GTP binding A.
   
 0.592
ENSCVAP00000017549
ATPase_AAA_core domain-containing protein.
   
  
 0.582
mrps25
Mitochondrial ribosomal protein S25.
      
 0.581
slc38a9
Solute carrier family 38 member 9.
    
 
 0.577
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.