STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
g3bp1GTPase activating protein (SH3 domain) binding protein 1. (495 aa)    
Predicted Functional Partners:
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.946
rack1
Receptor for activated C kinase 1.
   
 
 0.778
LOC107085587
Cell cycle associated protein 1a.
   
 
 0.754
caprin1
Cell cycle associated protein 1b.
   
 
 0.754
LOC107086824
Uncharacterized protein; Belongs to the peptidase C14A family.
      
 0.669
LOC107082055
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
      
 0.669
LOC107094290
LsmAD domain-containing protein.
   
 
 0.635
ubap2l
Ubiquitin associated protein 2-like.
   
 
 0.617
ubap2
Ubiquitin associated protein 2a.
   
 
 0.617
LOC107087282
Ubiquitin associated protein 2b.
   
 
 0.617
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.