STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107096785Glucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family. (725 aa)    
Predicted Functional Partners:
LOC107086906
EF-hand domain-containing protein.
   
 0.617
LOC107089556
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.617
LOC107084985
PRKCSH domain-containing protein.
   
 0.617
prkcsh
Protein kinase C substrate 80K-H.
   
 0.617
clgn
Calmegin.
    
 0.528
canx
Calnexin.
    
 0.528
LOC107105079
Uncharacterized protein.
   
 0.525
ENSCVAP00000016759
Uncharacterized protein.
   
 0.525
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.479
pygb
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.403
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.