STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPA17Sperm autoantigenic protein 17. (93 aa)    
Predicted Functional Partners:
akap14
Si:dkeyp-81f3.4.
    
 
 0.747
ENSCVAP00000023266
RIIa domain-containing protein.
   
 0.671
efcab7
EF-hand calcium binding domain 7.
    
   0.637
fancm
Uncharacterized protein.
    
 0.614
ENSCVAP00000032694
CH_2 domain-containing protein.
   
 0.581
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.551
LOC107083817
Survival of motor neuron 1, telomeric.
    
 0.538
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.537
pold1
DNA polymerase.
   
 0.534
akap7
A kinase (PRKA) anchor protein 7.
    
   0.504
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.