STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbp2Retinol binding protein 2a, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)    
Predicted Functional Partners:
LOC107082284
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.725
LOC107094918
LRAT domain-containing protein.
     
 0.677
LOC107098745
Apolipoprotein Ba.
   
 
 0.596
LOC107097770
Activating transcription factor 5b.
      
 0.547
LOC107081658
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.514
ENSCVAP00000001456
Vitellogenin domain-containing protein.
   
 
 0.514
ENSCVAP00000020812
Uncharacterized protein.
   
 
 0.514
igfals
Insulin-like growth factor binding protein, acid labile subunit.
      
 0.491
LOC107083683
Aldo-keto reductase family 1, member A1a (aldehyde reductase).
   
  0.489
AKR1D1
Aldo-keto reductase family 1 member D1.
   
  0.483
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.