STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhg7Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (728 aa)    
Predicted Functional Partners:
ENSCVAP00000017074
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.750
tradd
Tnfrsf1a-associated via death domain.
    
 0.736
LOC107103845
Tumor necrosis factor a (TNF superfamily, member 2).
    
 0.729
wdfy3
WD repeat and FYVE domain containing 3.
    
 0.635
LOC107093789
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.531
LOC107096228
Optineurin.
    
 0.531
birc6
Baculoviral IAP repeat containing 6.
    
 0.519
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.519
ENSCVAP00000004363
WW domain-containing protein.
    
 0.497
lyst
Lysosomal trafficking regulator.
    
 0.492
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.