STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmynd10Zinc finger, MYND-type containing 10. (447 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.991
dnaaf1
Dynein assembly factor 1, axonemal.
  
 
 0.745
Lrrc6
Leucine rich repeat containing 6.
    
 0.719
RSPH1
Radial spoke head component 1.
   
 
 0.713
wdr35
WD repeat-containing protein 35.
    
 0.695
mapk7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 
 0.692
dnai2
Dynein, axonemal, intermediate chain 2b.
   
 
 0.682
wdr19
WD repeat domain 19.
    
 0.676
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.675
armc4
Armadillo repeat containing 4.
   
  
 0.672
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.