STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
per2PAS domain-containing protein. (1497 aa)    
Predicted Functional Partners:
LOC107085871
Cryptochrome circadian regulator 1a.
   
 0.844
LOC107090434
Cryptochrome circadian regulator 2.
   
 0.842
timeless
Timeless circadian clock.
   
 0.825
LOC107100965
Cryptochrome DASH.
   
 0.786
LOC107082759
Cryptochrome circadian regulator 5.
   
 0.771
LOC107082489
Cryptochrome circadian regulator 1b.
   
 0.770
LOC107089544
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.757
LOC107096663
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.757
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.757
LOC107099355
Casein kinase 1, delta b; Belongs to the protein kinase superfamily.
    
 0.757
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.