STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005129Myosin_tail_1 domain-containing protein. (646 aa)    
Predicted Functional Partners:
LOC107088037
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.785
ENSCVAP00000030881
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.664
LOC107082151
Uncharacterized protein.
   
 0.556
ENSCVAP00000017449
Uncharacterized protein.
   
 0.556
LOC107086778
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.556
LOC107085399
Myosin, light chain 12, genome duplicate 1.
   
 0.540
ENSCVAP00000010420
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.540
myl7
Myosin, light chain 7, regulatory.
   
 0.540
LOC107098295
Myosin light chain 12B.
   
 0.540
LOC107102948
Myosin, light chain 9a, regulatory.
   
 0.540
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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