STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagaAlpha-galactosidase. (434 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase.
  
 
 0.948
hexa
Beta-hexosaminidase.
   
 
 0.938
ENSCVAP00000020526
Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4.
     
 0.902
LOC107087987
Uncharacterized protein.
     
  0.900
LOC107095424
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
  
 0.666
glb1
Galactosidase, beta 1; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.557
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.554
fuca1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
  
  
 0.553
fuca2
Alpha-L-fucosidase 2.
  
  
 0.548
galk1
Galactokinase 1.
   
 
 0.547
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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