STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pard3Par-3 family cell polarity regulator alpha, b. (1287 aa)    
Predicted Functional Partners:
ENSCVAP00000018988
Uncharacterized protein.
    
 0.882
prkcz
Protein kinase C, zeta.
    
 0.815
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.815
ENSCVAP00000008352
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.764
LOC107087824
Par-6 family cell polarity regulator gamma b.
    
 0.764
LOC107088920
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.679
mpp3
Membrane protein, palmitoylated 3a (MAGUK p55 subfamily member 3); Belongs to the MAGUK family.
    
 0.619
rnd3
Rho family GTPase 3a.
    
 0.610
ltbp2
Uncharacterized protein.
    
 
 0.583
jam3
Junctional adhesion molecule 3a.
    
 
 0.564
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.