STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103740Uncharacterized protein. (811 aa)    
Predicted Functional Partners:
il6st
Uncharacterized protein.
    
0.928
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.922
LOC107091287
IL-6 subfamily cytokine M17.
     
 0.911
LOC107092589
Uncharacterized protein.
     
 
0.900
LOC107091063
Ciliary neurotrophic factor receptor.
    
 0.886
LOC107084616
Uncharacterized protein.
     
  0.811
ENSCVAP00000001543
Katanin p60 subunit A-like 2.
   
 0.475
LOC107104443
Intersectin 2b.
    
 0.473
ENSCVAP00000031587
Uncharacterized protein.
    
 0.473
ENSCVAP00000031602
Uncharacterized protein.
    
 0.473
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.