STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myct1Myc target 1b. (184 aa)    
Predicted Functional Partners:
plekhj1
Pleckstrin homology domain containing, family J member 1.
      
 0.745
znf574
Zinc finger protein 526.
      
 0.737
gpatch1
G patch domain containing 1.
      
 0.734
LOC107102322
Zinc finger protein 574.
      
 0.708
afap1l2
Actin filament associated protein 1-like 2.
   
  
 0.619
glg1
Golgi glycoprotein 1b.
      
 0.606
LOC107093590
Golgi glycoprotein 1a.
      
 0.606
ptp4a1
Protein tyrosine phosphatase 4A1.
      
 0.605
PTPRC
Protein tyrosine phosphatase receptor type C.
      
 0.547
dbi
Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).
      
 0.464
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.