STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107097168Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (532 aa)    
Predicted Functional Partners:
LOC107089910
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
  0.942
aldh1a2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
   
 
 0.920
aldh1a3
Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.
   
 
 0.920
LOC107087635
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.911
LOC107094667
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.909
aox1
Aldehyde oxidase 6.
   
 
 0.907
LOC107102568
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.673
LOC107103711
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.673
LOC107088251
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 0.673
LOC107101850
Si:ch73-334d15.1; Belongs to the UDP-glycosyltransferase family.
   
 0.673
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.