STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUT7Fucosyltransferase 7. (344 aa)    
Predicted Functional Partners:
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.900
tcf19
Transcription factor 19 (SC1), like.
      
 0.664
lactb
Lactamase, beta.
      
 0.627
twf1
Twinfilin actin-binding protein 1a.
      
 0.547
LOC107090391
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
      
 0.547
nit2
Nitrilase family, member 2.
    
 
 0.518
cnnm2
Cyclin and CBS domain divalent metal cation transport mediator 2b.
   
 
 0.408
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
   
 
  0.407
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.