STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107095092Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.957
LOC107083415
N-acetylneuraminic acid synthase a.
  
  
 0.935
LOC107083416
N-acetylneuraminic acid synthase a.
  
  
 0.935
nans
N-acetylneuraminic acid synthase a.
  
  
 0.935
nanp
N-acetylneuraminic acid phosphatase.
     
 0.925
LOC107099834
Cytidine monophospho-N-acetylneuraminic acid hydroxylase.
     
 0.910
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.653
LOC107096058
Sorting nexin 6.
   
 0.653
LOC107082078
Si:dkey-28n18.9.
   
 0.653
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.647
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.