STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005423Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
egr2
Early growth response 2b.
  
 
 
0.902
LOC107089345
Forkhead box J3.
    
 0.523
irf8
Interferon regulatory factor 8.
    
 0.461
tfap2e
Transcription factor AP-2 epsilon.
    
 
 0.442
foxj3
Fork-head domain-containing protein.
    
 0.433
E2F3
E2F transcription factor 3.
    
 
 0.420
ENSCVAP00000010842
E2F_TDP domain-containing protein.
    
 
 0.420
angptl5
Angiopoietin-like 5.
      
 0.410
cd63
Tetraspanin.
      
 0.410
FOXC1
Forkhead box C1.
    
 0.403
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.