STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nek1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (264 aa)    
Predicted Functional Partners:
LOC107098265
Stathmin; Belongs to the stathmin family.
   
 
 0.684
ENSCVAP00000000837
Stathmin; Belongs to the stathmin family.
    
 
 0.676
LOC107088515
Stathmin; Belongs to the stathmin family.
    
 
 0.676
LOC107091647
Stathmin-like.
    
 
 0.676
LOC107104728
Stathmin; Belongs to the stathmin family.
    
 
 0.668
LOC107104011
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
  
 
0.581
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
  
 
0.580
nek2
NIMA-related kinase 2.
  
 
0.481
plk3
Serine/threonine-protein kinase PLK.
  
0.481
plk2
Serine/threonine-protein kinase PLK.
  
0.476
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.