STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCKARCholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family. (456 aa)    
Predicted Functional Partners:
cck
Gastrin domain-containing protein.
   
 0.980
LOC107086764
Gastrin domain-containing protein.
   
 0.980
LOC107099853
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.908
LOC107090766
Gastrin domain-containing protein.
     
  0.900
LOC107100829
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.866
LOC107097117
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.866
LOC107097118
Uncharacterized protein.
    
 0.866
LOC107099623
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.776
LOC107088987
Uncharacterized protein.
    
  0.700
LOC107088981
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.700
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.