STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005537Nanos homolog 2; Belongs to the nanos family. (135 aa)    
Predicted Functional Partners:
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.814
pum2
Pumilio RNA-binding family member 2.
   
 
 0.681
pum1
Pumilio RNA-binding family member 1.
   
 
 0.681
zbtb16
Zinc finger and BTB domain containing 16a.
    
 
 0.630
dazl
Deleted in azoospermia-like.
    
 
 0.611
edar
Ectodysplasin A receptor.
    
 0.609
cnot11
CCR4-NOT transcription complex, subunit 11.
    
 
 0.570
dnd1
RRM domain-containing protein.
      
 0.564
cnot3
CCR4-NOT transcription complex, subunit 3a.
    
 
 0.562
LOC107089013
CCR4-NOT transcription complex, subunit 3b.
    
 
 0.562
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.