STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107088342WASP like actin nucleation promoting factor b. (516 aa)    
Predicted Functional Partners:
LOC107104443
Intersectin 2b.
    
 0.985
ENSCVAP00000031587
Uncharacterized protein.
    
 0.985
ENSCVAP00000031602
Uncharacterized protein.
    
 0.985
CDC42
Cell division cycle 42.
   
 0.980
LOC107085118
Uncharacterized protein.
   
 0.980
LOC107082256
Uncharacterized protein.
   
 0.975
LOC107086129
Uncharacterized protein.
   
 0.975
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.975
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
 0.964
actb
Uncharacterized protein.
    
 0.959
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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