STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100250Uncharacterized protein. (516 aa)    
Predicted Functional Partners:
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.911
proc
Uncharacterized protein.
    
 0.650
ENSCVAP00000001175
Selectin E.
    
 0.449
LOC107090492
Collectin subfamily member 10.
    
 0.449
LAYN
Layilin a.
    
 0.448
CLEC3B
C-type lectin domain family 3, member Bb.
    
 0.448
LOC107089396
PH domain-containing protein.
    
 0.444
LOC107090355
Zgc:171965; Belongs to the G-protein coupled receptor 1 family.
    
 0.438
tfpi2
Tissue factor pathway inhibitor.
   
 
 0.432
LOC107086197
Uncharacterized protein.
    
 
 0.424
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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